Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Gm43530-201ENSMUST00000195920 274 ntBASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Mrpl54Q9CPW3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Gm10399-202ENSMUST00000202768 748 ntBASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Mrpl54Q9CPW3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Gm7332-201ENSMUST00000118351 454 ntBASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Mrpl54Q9CPW3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl54Q9CPW3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.77■□□□□ 0.28
Mrpl54Q9CPW3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl54Q9CPW3 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl54Q9CPW3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.77■□□□□ 0.28
Mrpl54Q9CPW3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Mrpl54Q9CPW3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.77■□□□□ 0.28
Mrpl54Q9CPW3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Mrpl54Q9CPW3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl54Q9CPW3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl54Q9CPW3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Mrpl54Q9CPW3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Gm27502-201ENSMUST00000183495 199 ntBASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Mrpl54Q9CPW3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Mrpl54Q9CPW3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Mrpl54Q9CPW3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Mrpl54Q9CPW3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms