Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.52■■□□□ 1.03
Trim11Q99PQ2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Trim11Q99PQ2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.51■■□□□ 1.03
Trim11Q99PQ2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trim11Q99PQ2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim11Q99PQ2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Trim11Q99PQ2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Trim11Q99PQ2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim11Q99PQ2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Trim11Q99PQ2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim11Q99PQ2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trim11Q99PQ2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trim11Q99PQ2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trim11Q99PQ2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Trim11Q99PQ2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.03
Trim11Q99PQ2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trim11Q99PQ2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.44■■□□□ 1.02
Trim11Q99PQ2 Gm43060-201ENSMUST00000200621 289 ntBASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms