Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn4Q99P72 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn4Q99P72 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Rtn4Q99P72 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Rtn4Q99P72 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rtn4Q99P72 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rtn4Q99P72 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC23.83■■□□□ 1.41
Rtn4Q99P72 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rtn4Q99P72 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Rtn4Q99P72 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rtn4Q99P72 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rtn4Q99P72 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.83■■□□□ 1.41
Rtn4Q99P72 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rtn4Q99P72 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Rtn4Q99P72 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn4Q99P72 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn4Q99P72 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn4Q99P72 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn4Q99P72 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Rtn4Q99P72 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.82■■□□□ 1.4
Rtn4Q99P72 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.82■■□□□ 1.4
Rtn4Q99P72 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rtn4Q99P72 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rtn4Q99P72 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Gm29994-201ENSMUST00000195495 1193 ntBASIC23.8■■□□□ 1.4
Rtn4Q99P72 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rtn4Q99P72 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn4Q99P72 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Gm12933-201ENSMUST00000120203 872 ntBASIC23.79■■□□□ 1.4
Rtn4Q99P72 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.79■■□□□ 1.4
Rtn4Q99P72 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Rtn4Q99P72 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
Rtn4Q99P72 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rtn4Q99P72 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn4Q99P72 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn4Q99P72 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Rtn4Q99P72 Mir5133-201ENSMUST00000174955 77 ntBASIC23.77■■□□□ 1.4
Rtn4Q99P72 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.77■■□□□ 1.4
Rtn4Q99P72 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn4Q99P72 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn4Q99P72 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rtn4Q99P72 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Rtn4Q99P72 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.76■■□□□ 1.39
Rtn4Q99P72 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Nespas-201ENSMUST00000143738 1083 ntBASIC23.76■■□□□ 1.39
Rtn4Q99P72 Gm6420-201ENSMUST00000193885 723 ntBASIC23.76■■□□□ 1.39
Rtn4Q99P72 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.76■■□□□ 1.39
Rtn4Q99P72 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Rtn4Q99P72 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rtn4Q99P72 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms