Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gtf2ird2Q99NI3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gtf2ird2Q99NI3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf2ird2Q99NI3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Gtf2ird2Q99NI3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Gtf2ird2Q99NI3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf2ird2Q99NI3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Gtf2ird2Q99NI3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf2ird2Q99NI3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gtf2ird2Q99NI3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Gtf2ird2Q99NI3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf2ird2Q99NI3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf2ird2Q99NI3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.36■□□□□ 0.69
Gtf2ird2Q99NI3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf2ird2Q99NI3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gtf2ird2Q99NI3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gtf2ird2Q99NI3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gtf2ird2Q99NI3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf2ird2Q99NI3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf2ird2Q99NI3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf2ird2Q99NI3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf2ird2Q99NI3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf2ird2Q99NI3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf2ird2Q99NI3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gtf2ird2Q99NI3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gtf2ird2Q99NI3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gtf2ird2Q99NI3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gtf2ird2Q99NI3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gtf2ird2Q99NI3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms