Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scrt1Q99M85 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.54■□□□□ 0.24
Scrt1Q99M85 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.54■□□□□ 0.24
Scrt1Q99M85 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scrt1Q99M85 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scrt1Q99M85 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scrt1Q99M85 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scrt1Q99M85 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.52■□□□□ 0.24
Scrt1Q99M85 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scrt1Q99M85 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.52■□□□□ 0.24
Scrt1Q99M85 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scrt1Q99M85 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scrt1Q99M85 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scrt1Q99M85 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scrt1Q99M85 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.52■□□□□ 0.23
Scrt1Q99M85 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.51■□□□□ 0.23
Scrt1Q99M85 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.51■□□□□ 0.23
Scrt1Q99M85 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scrt1Q99M85 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.5■□□□□ 0.23
Scrt1Q99M85 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scrt1Q99M85 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scrt1Q99M85 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.48■□□□□ 0.23
Scrt1Q99M85 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.48■□□□□ 0.23
Scrt1Q99M85 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scrt1Q99M85 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scrt1Q99M85 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scrt1Q99M85 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.47■□□□□ 0.23
Scrt1Q99M85 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scrt1Q99M85 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scrt1Q99M85 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms