Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smarcd2Q99JR8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smarcd2Q99JR8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Gm6576-201ENSMUST00000169678 883 ntBASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smarcd2Q99JR8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Smarcd2Q99JR8 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.14■□□□□ 0.66
Smarcd2Q99JR8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Gm11249-201ENSMUST00000117071 859 ntBASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Gm18666-201ENSMUST00000190039 958 ntBASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.14■□□□□ 0.65
Smarcd2Q99JR8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Smarcd2Q99JR8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd2Q99JR8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smarcd2Q99JR8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd2Q99JR8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd2Q99JR8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd2Q99JR8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd2Q99JR8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd2Q99JR8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.11■□□□□ 0.65
Smarcd2Q99JR8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smarcd2Q99JR8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Smarcd2Q99JR8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Smarcd2Q99JR8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms