Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cacna1dQ99246 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Gm13168-201ENSMUST00000121771 632 ntBASIC18.83■□□□□ 0.6
Cacna1dQ99246 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cacna1dQ99246 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1dQ99246 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1dQ99246 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cacna1dQ99246 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.81■□□□□ 0.6
Cacna1dQ99246 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cacna1dQ99246 Trmt13-210ENSMUST00000198454 880 ntBASIC18.81■□□□□ 0.6
Cacna1dQ99246 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1dQ99246 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacna1dQ99246 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.8■□□□□ 0.6
Cacna1dQ99246 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1dQ99246 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cacna1dQ99246 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1dQ99246 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cacna1dQ99246 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.79■□□□□ 0.6
Cacna1dQ99246 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1dQ99246 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cacna1dQ99246 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.78■□□□□ 0.6
Cacna1dQ99246 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.78■□□□□ 0.6
Cacna1dQ99246 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cacna1dQ99246 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1dQ99246 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.77■□□□□ 0.6
Cacna1dQ99246 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1dQ99246 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1dQ99246 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1dQ99246 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1dQ99246 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1dQ99246 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1dQ99246 Rab3c-203ENSMUST00000224180 967 ntBASIC18.76■□□□□ 0.59
Cacna1dQ99246 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Gm27275-201ENSMUST00000184318 272 ntBASIC18.76■□□□□ 0.59
Cacna1dQ99246 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cacna1dQ99246 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms