Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdhb8Q91XZ2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Gm7860-201ENSMUST00000121190 879 ntBASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pcdhb8Q91XZ2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Pcdhb8Q91XZ2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Pcdhb8Q91XZ2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb8Q91XZ2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb8Q91XZ2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Gm43060-201ENSMUST00000200621 289 ntBASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 BC021767-201ENSMUST00000126387 1716 ntBASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb8Q91XZ2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb8Q91XZ2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.35■□□□□ 0.53
Pcdhb8Q91XZ2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhb8Q91XZ2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb8Q91XZ2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhb8Q91XZ2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhb8Q91XZ2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms