Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb1Q91XX8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb1Q91XX8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb1Q91XX8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhgb1Q91XX8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.62■□□□□ 0.73
Pcdhgb1Q91XX8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhgb1Q91XX8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb1Q91XX8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb1Q91XX8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb1Q91XX8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb1Q91XX8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb1Q91XX8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb1Q91XX8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb1Q91XX8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Gm13148-201ENSMUST00000118892 745 ntBASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhgb1Q91XX8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb1Q91XX8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgb1Q91XX8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgb1Q91XX8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Pcdhgb1Q91XX8 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.58■□□□□ 0.72
Pcdhgb1Q91XX8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.58■□□□□ 0.72
Pcdhgb1Q91XX8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Pcdhgb1Q91XX8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb1Q91XX8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb1Q91XX8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Pcdhgb1Q91XX8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb1Q91XX8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb1Q91XX8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb1Q91XX8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb1Q91XX8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms