Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trex1Q91XB0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.77■■□□□ 1.08
Trex1Q91XB0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.77■■□□□ 1.08
Trex1Q91XB0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trex1Q91XB0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trex1Q91XB0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trex1Q91XB0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Trex1Q91XB0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.77■■□□□ 1.07
Trex1Q91XB0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Trex1Q91XB0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Trex1Q91XB0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Trex1Q91XB0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trex1Q91XB0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trex1Q91XB0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trex1Q91XB0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Trex1Q91XB0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trex1Q91XB0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trex1Q91XB0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.75■■□□□ 1.07
Trex1Q91XB0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Trex1Q91XB0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.75■■□□□ 1.07
Trex1Q91XB0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trex1Q91XB0 Gm10812-201ENSMUST00000099864 546 ntBASIC21.75■■□□□ 1.07
Trex1Q91XB0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Trex1Q91XB0 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.75■■□□□ 1.07
Trex1Q91XB0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trex1Q91XB0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trex1Q91XB0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trex1Q91XB0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trex1Q91XB0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.73■■□□□ 1.07
Trex1Q91XB0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trex1Q91XB0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.72■■□□□ 1.07
Trex1Q91XB0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Trex1Q91XB0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Gm2559-201ENSMUST00000201323 363 ntBASIC21.72■■□□□ 1.07
Trex1Q91XB0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trex1Q91XB0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.71■■□□□ 1.07
Trex1Q91XB0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.71■■□□□ 1.07
Trex1Q91XB0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Trex1Q91XB0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Trex1Q91XB0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.7■■□□□ 1.06
Trex1Q91XB0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.7■■□□□ 1.06
Trex1Q91XB0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Dio3-201ENSMUST00000097228 1449 ntBASIC21.69■■□□□ 1.06
Trex1Q91XB0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trex1Q91XB0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
Trex1Q91XB0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trex1Q91XB0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trex1Q91XB0 Gm44549-201ENSMUST00000208351 577 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms