Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Usp3Q91W36 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp3Q91W36 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Usp3Q91W36 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp3Q91W36 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp3Q91W36 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.47■□□□□ 0.71
Usp3Q91W36 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Usp3Q91W36 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp3Q91W36 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Usp3Q91W36 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp3Q91W36 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Nespas-201ENSMUST00000143738 1083 ntBASIC19.46■□□□□ 0.71
Usp3Q91W36 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp3Q91W36 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp3Q91W36 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp3Q91W36 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Usp3Q91W36 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp3Q91W36 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp3Q91W36 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp3Q91W36 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.45■□□□□ 0.7
Usp3Q91W36 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp3Q91W36 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp3Q91W36 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.45■□□□□ 0.7
Usp3Q91W36 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp3Q91W36 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp3Q91W36 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Usp3Q91W36 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp3Q91W36 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp3Q91W36 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp3Q91W36 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp3Q91W36 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.45■□□□□ 0.7
Usp3Q91W36 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp3Q91W36 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp3Q91W36 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Usp3Q91W36 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp3Q91W36 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp3Q91W36 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp3Q91W36 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp3Q91W36 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp3Q91W36 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp3Q91W36 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp3Q91W36 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.43■□□□□ 0.7
Usp3Q91W36 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.43■□□□□ 0.7
Usp3Q91W36 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.43■□□□□ 0.7
Usp3Q91W36 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp3Q91W36 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.43■□□□□ 0.7
Usp3Q91W36 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp3Q91W36 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Usp3Q91W36 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp3Q91W36 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp3Q91W36 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp3Q91W36 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 BC021767-201ENSMUST00000126387 1716 ntBASIC19.42■□□□□ 0.7
Usp3Q91W36 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Usp3Q91W36 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.42■□□□□ 0.7
Usp3Q91W36 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.42■□□□□ 0.7
Usp3Q91W36 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp3Q91W36 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp3Q91W36 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp3Q91W36 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms