Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.83■□□□□ 0.77
Snx9Q91VH2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Snx9Q91VH2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Snx9Q91VH2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snx9Q91VH2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snx9Q91VH2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Snx9Q91VH2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Snx9Q91VH2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Snx9Q91VH2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Snx9Q91VH2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Snx9Q91VH2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Snx9Q91VH2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Snx9Q91VH2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.79■□□□□ 0.76
Snx9Q91VH2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.79■□□□□ 0.76
Snx9Q91VH2 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.79■□□□□ 0.76
Snx9Q91VH2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Snx9Q91VH2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.78■□□□□ 0.76
Snx9Q91VH2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Gm10602-201ENSMUST00000098239 609 ntBASIC19.78■□□□□ 0.76
Snx9Q91VH2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Snx9Q91VH2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Snx9Q91VH2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Snx9Q91VH2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.76■□□□□ 0.75
Snx9Q91VH2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Snx9Q91VH2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Snx9Q91VH2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.75■□□□□ 0.75
Snx9Q91VH2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.75■□□□□ 0.75
Snx9Q91VH2 Gm6365-201ENSMUST00000054711 744 ntBASIC19.75■□□□□ 0.75
Snx9Q91VH2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx9Q91VH2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Snx9Q91VH2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.75■□□□□ 0.75
Snx9Q91VH2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms