Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cspg4Q8VHY0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cspg4Q8VHY0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Gm13158-201ENSMUST00000122007 736 ntBASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cspg4Q8VHY0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Gm18666-201ENSMUST00000190039 958 ntBASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Gm44771-201ENSMUST00000206975 626 ntBASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cspg4Q8VHY0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 Gm7461-201ENSMUST00000058918 827 ntBASIC16.29■□□□□ 0.2
Cspg4Q8VHY0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cspg4Q8VHY0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 Gm2399-201ENSMUST00000104944 225 ntBASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 Gm5417-201ENSMUST00000079706 384 ntBASIC16.27■□□□□ 0.2
Cspg4Q8VHY0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms