Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.24■□□□□ 0.51
Vps4aQ8VEJ9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.24■□□□□ 0.51
Vps4aQ8VEJ9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4aQ8VEJ9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4aQ8VEJ9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps4aQ8VEJ9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vps4aQ8VEJ9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps4aQ8VEJ9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.23■□□□□ 0.51
Vps4aQ8VEJ9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps4aQ8VEJ9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Vps4aQ8VEJ9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.2■□□□□ 0.5
Vps4aQ8VEJ9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps4aQ8VEJ9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Gm10602-201ENSMUST00000098239 609 ntBASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps4aQ8VEJ9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps4aQ8VEJ9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms