Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Gm29257-201ENSMUST00000186115 639 ntBASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Chrna3Q8R4G9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
Chrna3Q8R4G9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Chrna3Q8R4G9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna3Q8R4G9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.5■□□□□ 0.55
Chrna3Q8R4G9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chrna3Q8R4G9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chrna3Q8R4G9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Gm10602-201ENSMUST00000098239 609 ntBASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chrna3Q8R4G9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Chrna3Q8R4G9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms