Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nup85Q8R480 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nup85Q8R480 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nup85Q8R480 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup85Q8R480 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup85Q8R480 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup85Q8R480 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup85Q8R480 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nup85Q8R480 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nup85Q8R480 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup85Q8R480 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup85Q8R480 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup85Q8R480 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nup85Q8R480 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.32■□□□□ 0.68
Nup85Q8R480 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup85Q8R480 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nup85Q8R480 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nup85Q8R480 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Nup85Q8R480 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Nup85Q8R480 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 Golph3-205ENSMUST00000228671 2842 ntBASIC19.31■□□□□ 0.68
Nup85Q8R480 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nup85Q8R480 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nup85Q8R480 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nup85Q8R480 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Nup85Q8R480 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup85Q8R480 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Nup85Q8R480 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Nup85Q8R480 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup85Q8R480 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup85Q8R480 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nup85Q8R480 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.3■□□□□ 0.68
Nup85Q8R480 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nup85Q8R480 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nup85Q8R480 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.29■□□□□ 0.68
Nup85Q8R480 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nup85Q8R480 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Nup85Q8R480 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nup85Q8R480 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 Gm13234-201ENSMUST00000120010 747 ntBASIC19.28■□□□□ 0.68
Nup85Q8R480 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.28■□□□□ 0.68
Nup85Q8R480 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.28■□□□□ 0.68
Nup85Q8R480 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Nup85Q8R480 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.28■□□□□ 0.68
Nup85Q8R480 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nup85Q8R480 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nup85Q8R480 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nup85Q8R480 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Nup85Q8R480 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nup85Q8R480 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.27■□□□□ 0.68
Nup85Q8R480 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nup85Q8R480 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Nup85Q8R480 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup85Q8R480 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Nup85Q8R480 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup85Q8R480 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nup85Q8R480 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms