Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ccdc58Q8R3Q6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc58Q8R3Q6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 BC021767-201ENSMUST00000126387 1716 ntBASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc58Q8R3Q6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc58Q8R3Q6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc58Q8R3Q6 Gm7417-201ENSMUST00000192950 473 ntBASIC16.84■□□□□ 0.29
Ccdc58Q8R3Q6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.84■□□□□ 0.29
Ccdc58Q8R3Q6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc58Q8R3Q6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc58Q8R3Q6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc58Q8R3Q6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc58Q8R3Q6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Ccdc58Q8R3Q6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc58Q8R3Q6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc58Q8R3Q6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.82■□□□□ 0.28
Ccdc58Q8R3Q6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc58Q8R3Q6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc58Q8R3Q6 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.81■□□□□ 0.28
Ccdc58Q8R3Q6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc58Q8R3Q6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms