Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Zcchc9Q8R1J3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 AA386476-201ENSMUST00000098781 1665 ntBASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.81■□□□□ 0.6
Zcchc9Q8R1J3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Zcchc9Q8R1J3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Gm13534-201ENSMUST00000121169 513 ntBASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Gm6211-202ENSMUST00000167849 925 ntBASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Zcchc9Q8R1J3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.78■□□□□ 0.6
Zcchc9Q8R1J3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc9Q8R1J3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc9Q8R1J3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc9Q8R1J3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Zcchc9Q8R1J3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc9Q8R1J3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Zcchc9Q8R1J3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Zcchc9Q8R1J3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Zcchc9Q8R1J3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
Zcchc9Q8R1J3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Zcchc9Q8R1J3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Zcchc9Q8R1J3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Zcchc9Q8R1J3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms