Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Alms1Q8K4E0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.58■□□□□ 0.57
Alms1Q8K4E0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Alms1Q8K4E0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.58■□□□□ 0.57
Alms1Q8K4E0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Alms1Q8K4E0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Alms1Q8K4E0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Alms1Q8K4E0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Gm12896-201ENSMUST00000118430 226 ntBASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.55■□□□□ 0.56
Alms1Q8K4E0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Rab3c-203ENSMUST00000224180 967 ntBASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.54■□□□□ 0.56
Alms1Q8K4E0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Alms1Q8K4E0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.53■□□□□ 0.56
Alms1Q8K4E0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Alms1Q8K4E0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Alms1Q8K4E0 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.52■□□□□ 0.55
Alms1Q8K4E0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Alms1Q8K4E0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Alms1Q8K4E0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms