Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Abca8bQ8K440 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Abca8bQ8K440 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Abca8bQ8K440 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Abca8bQ8K440 Gm20100-201ENSMUST00000209418 2272 ntBASIC28.37■■■□□ 2.13
Abca8bQ8K440 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Abca8bQ8K440 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Abca8bQ8K440 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Abca8bQ8K440 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC28.35■■■□□ 2.13
Abca8bQ8K440 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Abca8bQ8K440 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Abca8bQ8K440 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC28.35■■■□□ 2.13
Abca8bQ8K440 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Abca8bQ8K440 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Snhg20-203ENSMUST00000182811 2153 ntBASIC28.34■■■□□ 2.13
Abca8bQ8K440 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Abca8bQ8K440 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Abca8bQ8K440 Arhgef4-208ENSMUST00000211073 171 ntBASIC28.33■■■□□ 2.13
Abca8bQ8K440 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Abca8bQ8K440 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Abca8bQ8K440 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Abca8bQ8K440 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
Abca8bQ8K440 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8bQ8K440 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Abca8bQ8K440 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8bQ8K440 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8bQ8K440 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8bQ8K440 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC28.31■■■□□ 2.12
Abca8bQ8K440 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Abca8bQ8K440 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
Abca8bQ8K440 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8bQ8K440 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8bQ8K440 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Abca8bQ8K440 Gm7889-201ENSMUST00000185591 958 ntBASIC28.3■■■□□ 2.12
Abca8bQ8K440 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC28.3■■■□□ 2.12
Abca8bQ8K440 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
Abca8bQ8K440 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Abca8bQ8K440 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca8bQ8K440 Gm12504-201ENSMUST00000120860 2231 ntBASIC28.29■■■□□ 2.12
Abca8bQ8K440 Gm3375-201ENSMUST00000203929 796 ntBASIC28.29■■■□□ 2.12
Abca8bQ8K440 Gm10459-201ENSMUST00000202708 1155 ntBASIC28.29■■■□□ 2.12
Abca8bQ8K440 AC160393.1-201ENSMUST00000218378 1279 ntBASIC28.29■■■□□ 2.12
Abca8bQ8K440 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca8bQ8K440 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Abca8bQ8K440 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Abca8bQ8K440 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Gm13559-201ENSMUST00000120476 863 ntBASIC28.27■■■□□ 2.12
Abca8bQ8K440 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Flg-201ENSMUST00000050758 1488 ntBASIC28.27■■■□□ 2.12
Abca8bQ8K440 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Abca8bQ8K440 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Abca8bQ8K440 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
Abca8bQ8K440 Gm30025-201ENSMUST00000218555 728 ntBASIC28.26■■■□□ 2.11
Abca8bQ8K440 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Abca8bQ8K440 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Abca8bQ8K440 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC28.25■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms