Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Gm7860-201ENSMUST00000121190 879 ntBASIC18.91■□□□□ 0.62
Scara5Q8K299 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.91■□□□□ 0.62
Scara5Q8K299 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Scara5Q8K299 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scara5Q8K299 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Scara5Q8K299 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.9■□□□□ 0.62
Scara5Q8K299 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.9■□□□□ 0.62
Scara5Q8K299 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.9■□□□□ 0.62
Scara5Q8K299 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scara5Q8K299 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Scara5Q8K299 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scara5Q8K299 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Scara5Q8K299 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Scara5Q8K299 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scara5Q8K299 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Scara5Q8K299 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scara5Q8K299 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Scara5Q8K299 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scara5Q8K299 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Scara5Q8K299 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.89■□□□□ 0.61
Scara5Q8K299 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scara5Q8K299 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Scara5Q8K299 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scara5Q8K299 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scara5Q8K299 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scara5Q8K299 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scara5Q8K299 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
Scara5Q8K299 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.88■□□□□ 0.61
Scara5Q8K299 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.88■□□□□ 0.61
Scara5Q8K299 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Scara5Q8K299 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.88■□□□□ 0.61
Scara5Q8K299 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.88■□□□□ 0.61
Scara5Q8K299 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scara5Q8K299 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scara5Q8K299 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scara5Q8K299 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Scara5Q8K299 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.87■□□□□ 0.61
Scara5Q8K299 Gm2559-201ENSMUST00000201323 363 ntBASIC18.87■□□□□ 0.61
Scara5Q8K299 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scara5Q8K299 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scara5Q8K299 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scara5Q8K299 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scara5Q8K299 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.86■□□□□ 0.61
Scara5Q8K299 Gm715-201ENSMUST00000117865 831 ntBASIC18.86■□□□□ 0.61
Scara5Q8K299 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scara5Q8K299 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.86■□□□□ 0.61
Scara5Q8K299 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scara5Q8K299 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.86■□□□□ 0.61
Scara5Q8K299 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scara5Q8K299 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scara5Q8K299 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Scara5Q8K299 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.85■□□□□ 0.61
Scara5Q8K299 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Scara5Q8K299 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.85■□□□□ 0.61
Scara5Q8K299 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scara5Q8K299 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scara5Q8K299 Dio3-201ENSMUST00000097228 1449 ntBASIC18.84■□□□□ 0.61
Scara5Q8K299 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scara5Q8K299 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scara5Q8K299 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scara5Q8K299 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.84■□□□□ 0.61
Scara5Q8K299 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scara5Q8K299 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.84■□□□□ 0.61
Scara5Q8K299 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.84■□□□□ 0.61
Scara5Q8K299 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scara5Q8K299 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scara5Q8K299 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scara5Q8K299 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms