Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip4Q8CI96 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip4Q8CI96 Rarb-207ENSMUST00000225921 2756 ntBASIC18.94■□□□□ 0.62
Clip4Q8CI96 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Clip4Q8CI96 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Clip4Q8CI96 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Gm5874-201ENSMUST00000096101 508 ntBASIC18.93■□□□□ 0.62
Clip4Q8CI96 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clip4Q8CI96 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Gm10493-201ENSMUST00000097270 612 ntBASIC18.92■□□□□ 0.62
Clip4Q8CI96 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clip4Q8CI96 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.92■□□□□ 0.62
Clip4Q8CI96 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clip4Q8CI96 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.91■□□□□ 0.62
Clip4Q8CI96 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.9■□□□□ 0.62
Clip4Q8CI96 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clip4Q8CI96 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clip4Q8CI96 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Clip4Q8CI96 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.89■□□□□ 0.61
Clip4Q8CI96 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Clip4Q8CI96 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Clip4Q8CI96 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms