Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rp1l1Q8CGM2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rp1l1Q8CGM2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rp1l1Q8CGM2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rp1l1Q8CGM2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rp1l1Q8CGM2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.92■□□□□ 0.78
Rp1l1Q8CGM2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rp1l1Q8CGM2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Gm21814-202ENSMUST00000203277 873 ntBASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1l1Q8CGM2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.89■□□□□ 0.78
Rp1l1Q8CGM2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rp1l1Q8CGM2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rp1l1Q8CGM2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Rp1l1Q8CGM2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rp1l1Q8CGM2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rp1l1Q8CGM2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1l1Q8CGM2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1l1Q8CGM2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1l1Q8CGM2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms