Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc38Q8CDN8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc38Q8CDN8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.95■□□□□ 0.94
Ccdc38Q8CDN8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Gm26833-201ENSMUST00000180899 440 ntBASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccdc38Q8CDN8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccdc38Q8CDN8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc38Q8CDN8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Gm43017-201ENSMUST00000198296 752 ntBASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Gm40848-201ENSMUST00000221998 324 ntBASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc38Q8CDN8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc38Q8CDN8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc38Q8CDN8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc38Q8CDN8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc38Q8CDN8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.9■□□□□ 0.94
Ccdc38Q8CDN8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc38Q8CDN8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Ccdc38Q8CDN8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms