Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.13■■□□□ 1.13
Shisa4Q8CA71 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC22.13■■□□□ 1.13
Shisa4Q8CA71 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Shisa4Q8CA71 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Shisa4Q8CA71 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shisa4Q8CA71 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Shisa4Q8CA71 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Shisa4Q8CA71 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.12■■□□□ 1.13
Shisa4Q8CA71 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Shisa4Q8CA71 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Gm10602-201ENSMUST00000098239 609 ntBASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Shisa4Q8CA71 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Gm5784-201ENSMUST00000179344 2478 ntBASIC22.1■■□□□ 1.13
Shisa4Q8CA71 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.1■■□□□ 1.13
Shisa4Q8CA71 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Shisa4Q8CA71 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Shisa4Q8CA71 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Shisa4Q8CA71 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC22.08■■□□□ 1.13
Shisa4Q8CA71 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Shisa4Q8CA71 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Shisa4Q8CA71 BC021767-201ENSMUST00000126387 1716 ntBASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Golph3-205ENSMUST00000228671 2842 ntBASIC22.07■■□□□ 1.12
Shisa4Q8CA71 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Shisa4Q8CA71 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Shisa4Q8CA71 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Shisa4Q8CA71 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms