Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Rab3c-203ENSMUST00000224180 967 ntBASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.32■□□□□ 0.68
Cstf2tQ8C7E9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cstf2tQ8C7E9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Gm7367-201ENSMUST00000057611 492 ntBASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cstf2tQ8C7E9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.29■□□□□ 0.68
Cstf2tQ8C7E9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cstf2tQ8C7E9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Gm10231-201ENSMUST00000181584 441 ntBASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Gm10175-202ENSMUST00000208752 441 ntBASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cstf2tQ8C7E9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cstf2tQ8C7E9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cstf2tQ8C7E9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cstf2tQ8C7E9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cstf2tQ8C7E9 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.25■□□□□ 0.67
Cstf2tQ8C7E9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cstf2tQ8C7E9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cstf2tQ8C7E9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cstf2tQ8C7E9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms