Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne1Q8C166 Gm7860-201ENSMUST00000121190 879 ntBASIC17.64■□□□□ 0.41
Cpne1Q8C166 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne1Q8C166 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.64■□□□□ 0.41
Cpne1Q8C166 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne1Q8C166 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne1Q8C166 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cpne1Q8C166 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cpne1Q8C166 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpne1Q8C166 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Gm38205-201ENSMUST00000192243 258 ntBASIC17.63■□□□□ 0.41
Cpne1Q8C166 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpne1Q8C166 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Cpne1Q8C166 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.62■□□□□ 0.41
Cpne1Q8C166 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Gm42778-201ENSMUST00000199644 553 ntBASIC17.62■□□□□ 0.41
Cpne1Q8C166 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.62■□□□□ 0.41
Cpne1Q8C166 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpne1Q8C166 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne1Q8C166 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpne1Q8C166 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Gm8495-201ENSMUST00000188740 694 ntBASIC17.59■□□□□ 0.41
Cpne1Q8C166 Gm42642-201ENSMUST00000200683 355 ntBASIC17.59■□□□□ 0.41
Cpne1Q8C166 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpne1Q8C166 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne1Q8C166 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne1Q8C166 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne1Q8C166 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cpne1Q8C166 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne1Q8C166 Gm13234-201ENSMUST00000120010 747 ntBASIC17.58■□□□□ 0.4
Cpne1Q8C166 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne1Q8C166 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne1Q8C166 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cpne1Q8C166 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.58■□□□□ 0.4
Cpne1Q8C166 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne1Q8C166 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne1Q8C166 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cpne1Q8C166 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cpne1Q8C166 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.58■□□□□ 0.4
Cpne1Q8C166 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne1Q8C166 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne1Q8C166 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne1Q8C166 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cpne1Q8C166 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.57■□□□□ 0.4
Cpne1Q8C166 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.57■□□□□ 0.4
Cpne1Q8C166 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms