Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trub1Q8C0D0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trub1Q8C0D0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trub1Q8C0D0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trub1Q8C0D0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trub1Q8C0D0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.54■□□□□ 0.72
Trub1Q8C0D0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trub1Q8C0D0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trub1Q8C0D0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trub1Q8C0D0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trub1Q8C0D0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trub1Q8C0D0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trub1Q8C0D0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trub1Q8C0D0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trub1Q8C0D0 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trub1Q8C0D0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Gm9988-201ENSMUST00000069786 435 ntBASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trub1Q8C0D0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trub1Q8C0D0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms