Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Lig4Q8BTF7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Lig4Q8BTF7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig4Q8BTF7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig4Q8BTF7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Lig4Q8BTF7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.96■□□□□ 0.79
Lig4Q8BTF7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lig4Q8BTF7 Gm6365-201ENSMUST00000054711 744 ntBASIC19.96■□□□□ 0.79
Lig4Q8BTF7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lig4Q8BTF7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.96■□□□□ 0.79
Lig4Q8BTF7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.96■□□□□ 0.79
Lig4Q8BTF7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
Lig4Q8BTF7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig4Q8BTF7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Notumos-201ENSMUST00000151998 2659 ntBASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Lig4Q8BTF7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig4Q8BTF7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Gm7290-201ENSMUST00000104990 617 ntBASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Gm12918-201ENSMUST00000120234 636 ntBASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Gm15710-201ENSMUST00000121821 636 ntBASIC19.92■□□□□ 0.78
Lig4Q8BTF7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Gm5075-201ENSMUST00000196916 622 ntBASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.92■□□□□ 0.78
Lig4Q8BTF7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms