Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdkl3Q8BLF2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdkl3Q8BLF2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cdkl3Q8BLF2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdkl3Q8BLF2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdkl3Q8BLF2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.27■□□□□ 0.19
Cdkl3Q8BLF2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkl3Q8BLF2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkl3Q8BLF2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdkl3Q8BLF2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdkl3Q8BLF2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdkl3Q8BLF2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms