Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Gm44549-201ENSMUST00000208351 577 ntBASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tdp1Q8BJ37 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Mir6982-201ENSMUST00000184354 68 ntBASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tdp1Q8BJ37 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tdp1Q8BJ37 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tdp1Q8BJ37 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tdp1Q8BJ37 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tdp1Q8BJ37 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tdp1Q8BJ37 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Gm11249-201ENSMUST00000117071 859 ntBASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tdp1Q8BJ37 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tdp1Q8BJ37 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Tdp1Q8BJ37 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.85■□□□□ 0.93
Tdp1Q8BJ37 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms