Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.14■■□□□ 1.14
SpidrQ8BGX7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SpidrQ8BGX7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SpidrQ8BGX7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22.14■■□□□ 1.13
SpidrQ8BGX7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SpidrQ8BGX7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SpidrQ8BGX7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SpidrQ8BGX7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SpidrQ8BGX7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SpidrQ8BGX7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.12■■□□□ 1.13
SpidrQ8BGX7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SpidrQ8BGX7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Gm2399-201ENSMUST00000104944 225 ntBASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SpidrQ8BGX7 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.1■■□□□ 1.13
SpidrQ8BGX7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Gm6576-201ENSMUST00000169678 883 ntBASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Gm10698-201ENSMUST00000182663 604 ntBASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SpidrQ8BGX7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Gm18666-201ENSMUST00000190039 958 ntBASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.08■■□□□ 1.13
SpidrQ8BGX7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SpidrQ8BGX7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SpidrQ8BGX7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SpidrQ8BGX7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SpidrQ8BGX7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SpidrQ8BGX7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SpidrQ8BGX7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SpidrQ8BGX7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms