Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smndc1Q8BGT7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smndc1Q8BGT7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Smndc1Q8BGT7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Golgb1-201ENSMUST00000023534 498 ntBASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smndc1Q8BGT7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smndc1Q8BGT7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smndc1Q8BGT7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smndc1Q8BGT7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smndc1Q8BGT7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smndc1Q8BGT7 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms