Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Gm26524-201ENSMUST00000192339 390 ntBASIC18.02■□□□□ 0.48
Vrk1Q80X41 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vrk1Q80X41 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Vrk1Q80X41 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
Vrk1Q80X41 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vrk1Q80X41 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vrk1Q80X41 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.02■□□□□ 0.47
Vrk1Q80X41 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vrk1Q80X41 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Vrk1Q80X41 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Rab3c-203ENSMUST00000224180 967 ntBASIC18.01■□□□□ 0.47
Vrk1Q80X41 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.01■□□□□ 0.47
Vrk1Q80X41 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vrk1Q80X41 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Gm37563-201ENSMUST00000192580 1513 ntBASIC18■□□□□ 0.47
Vrk1Q80X41 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Vrk1Q80X41 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18■□□□□ 0.47
Vrk1Q80X41 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18■□□□□ 0.47
Vrk1Q80X41 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Vrk1Q80X41 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18■□□□□ 0.47
Vrk1Q80X41 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Vrk1Q80X41 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vrk1Q80X41 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Vrk1Q80X41 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Trmt13-210ENSMUST00000198454 880 ntBASIC17.99■□□□□ 0.47
Vrk1Q80X41 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Gm10252-201ENSMUST00000209541 832 ntBASIC17.99■□□□□ 0.47
Vrk1Q80X41 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Vrk1Q80X41 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Vrk1Q80X41 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Vrk1Q80X41 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms