Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.11■□□□□ 0.49
Otop1Q80VM9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.11■□□□□ 0.49
Otop1Q80VM9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.11■□□□□ 0.49
Otop1Q80VM9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.1■□□□□ 0.49
Otop1Q80VM9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.1■□□□□ 0.49
Otop1Q80VM9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Otop1Q80VM9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Otop1Q80VM9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Otop1Q80VM9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Otop1Q80VM9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Otop1Q80VM9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Otop1Q80VM9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Gm5643-201ENSMUST00000117081 966 ntBASIC18.09■□□□□ 0.49
Otop1Q80VM9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Otop1Q80VM9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Otop1Q80VM9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Otop1Q80VM9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Otop1Q80VM9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Otop1Q80VM9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.07■□□□□ 0.48
Otop1Q80VM9 Gm7860-201ENSMUST00000121190 879 ntBASIC18.07■□□□□ 0.48
Otop1Q80VM9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.07■□□□□ 0.48
Otop1Q80VM9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Otop1Q80VM9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Otop1Q80VM9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.05■□□□□ 0.48
Otop1Q80VM9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.05■□□□□ 0.48
Otop1Q80VM9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.04■□□□□ 0.48
Otop1Q80VM9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Otop1Q80VM9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Otop1Q80VM9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms