Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdh19Q80TF3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdh19Q80TF3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Gm5408-201ENSMUST00000197998 747 ntBASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdh19Q80TF3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdh19Q80TF3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh19Q80TF3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdh19Q80TF3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Pcdh19Q80TF3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Gm6211-202ENSMUST00000167849 925 ntBASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh19Q80TF3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Gm12441-201ENSMUST00000121806 588 ntBASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh19Q80TF3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdh19Q80TF3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh19Q80TF3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms