Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ush1gQ80T11 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.68■□□□□ 0.9
Ush1gQ80T11 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ush1gQ80T11 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ush1gQ80T11 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Ush1gQ80T11 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.66■□□□□ 0.9
Ush1gQ80T11 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ush1gQ80T11 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.65■□□□□ 0.9
Ush1gQ80T11 Gm37856-201ENSMUST00000191634 999 ntBASIC20.65■□□□□ 0.9
Ush1gQ80T11 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ush1gQ80T11 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.65■□□□□ 0.9
Ush1gQ80T11 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ush1gQ80T11 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
Ush1gQ80T11 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Ush1gQ80T11 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1gQ80T11 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1gQ80T11 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1gQ80T11 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1gQ80T11 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Ush1gQ80T11 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1gQ80T11 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ush1gQ80T11 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.64■□□□□ 0.89
Ush1gQ80T11 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1gQ80T11 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ush1gQ80T11 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1gQ80T11 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1gQ80T11 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1gQ80T11 Mir7071-201ENSMUST00000184847 69 ntBASIC20.63■□□□□ 0.89
Ush1gQ80T11 Trmt13-210ENSMUST00000198454 880 ntBASIC20.63■□□□□ 0.89
Ush1gQ80T11 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Ush1gQ80T11 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ush1gQ80T11 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.63■□□□□ 0.89
Ush1gQ80T11 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.62■□□□□ 0.89
Ush1gQ80T11 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ush1gQ80T11 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.61■□□□□ 0.89
Ush1gQ80T11 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.61■□□□□ 0.89
Ush1gQ80T11 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms