Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Gm6576-201ENSMUST00000169678 883 ntBASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Prpf38bQ80SY5 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Prpf38bQ80SY5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Gm11643-201ENSMUST00000119578 864 ntBASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Prpf38bQ80SY5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Gm6365-201ENSMUST00000054711 744 ntBASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.66■□□□□ 0.74
Prpf38bQ80SY5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Prpf38bQ80SY5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38bQ80SY5 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38bQ80SY5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Prpf38bQ80SY5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.64■□□□□ 0.74
Prpf38bQ80SY5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Prpf38bQ80SY5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Prpf38bQ80SY5 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Prpf38bQ80SY5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms