Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.4■□□□□ 0.38
Pif1Q80SX8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Pif1Q80SX8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pif1Q80SX8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pif1Q80SX8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.38■□□□□ 0.37
Pif1Q80SX8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.38■□□□□ 0.37
Pif1Q80SX8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.38■□□□□ 0.37
Pif1Q80SX8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pif1Q80SX8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Gm10812-201ENSMUST00000099864 546 ntBASIC17.37■□□□□ 0.37
Pif1Q80SX8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pif1Q80SX8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.36■□□□□ 0.37
Pif1Q80SX8 Rab3c-203ENSMUST00000224180 967 ntBASIC17.36■□□□□ 0.37
Pif1Q80SX8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pif1Q80SX8 Golph3-202ENSMUST00000226517 2359 ntBASIC17.36■□□□□ 0.37
Pif1Q80SX8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.35■□□□□ 0.37
Pif1Q80SX8 Gm26524-201ENSMUST00000192339 390 ntBASIC17.35■□□□□ 0.37
Pif1Q80SX8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pif1Q80SX8 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.34■□□□□ 0.37
Pif1Q80SX8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pif1Q80SX8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pif1Q80SX8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Pif1Q80SX8 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.33■□□□□ 0.37
Pif1Q80SX8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms