Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Rfx4Q7TNK1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rfx4Q7TNK1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rfx4Q7TNK1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rfx4Q7TNK1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rfx4Q7TNK1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rfx4Q7TNK1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rfx4Q7TNK1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rfx4Q7TNK1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx4Q7TNK1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx4Q7TNK1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rfx4Q7TNK1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx4Q7TNK1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rfx4Q7TNK1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.08■□□□□ 0.48
Rfx4Q7TNK1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rfx4Q7TNK1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.08■□□□□ 0.48
Rfx4Q7TNK1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx4Q7TNK1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx4Q7TNK1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rfx4Q7TNK1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.07■□□□□ 0.48
Rfx4Q7TNK1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rfx4Q7TNK1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms