Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Ubfd1Q78JW9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.42■□□□□ 0.54
Ubfd1Q78JW9 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.42■□□□□ 0.54
Ubfd1Q78JW9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubfd1Q78JW9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubfd1Q78JW9 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.42■□□□□ 0.54
Ubfd1Q78JW9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ubfd1Q78JW9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Gm27011-201ENSMUST00000182352 972 ntBASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ubfd1Q78JW9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ubfd1Q78JW9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ubfd1Q78JW9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ubfd1Q78JW9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ubfd1Q78JW9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.38■□□□□ 0.53
Ubfd1Q78JW9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ubfd1Q78JW9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ubfd1Q78JW9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Gm26524-201ENSMUST00000192339 390 ntBASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ubfd1Q78JW9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms