Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.85■□□□□ 0.77
Lsm8Q6ZWM4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Gm10493-201ENSMUST00000097270 612 ntBASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Lsm8Q6ZWM4 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Lsm8Q6ZWM4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm8Q6ZWM4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm8Q6ZWM4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm8Q6ZWM4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm8Q6ZWM4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Gm13234-201ENSMUST00000120010 747 ntBASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm8Q6ZWM4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm8Q6ZWM4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Lsm8Q6ZWM4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm8Q6ZWM4 Golph3-205ENSMUST00000228671 2842 ntBASIC19.79■□□□□ 0.76
Lsm8Q6ZWM4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.79■□□□□ 0.76
Lsm8Q6ZWM4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.79■□□□□ 0.76
Lsm8Q6ZWM4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm8Q6ZWM4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms