Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ddx55Q6ZPL9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Gm13158-201ENSMUST00000122007 736 ntBASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ddx55Q6ZPL9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ddx55Q6ZPL9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.66■■□□□ 1.06
Ddx55Q6ZPL9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ddx55Q6ZPL9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Ddx55Q6ZPL9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx55Q6ZPL9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx55Q6ZPL9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ddx55Q6ZPL9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx55Q6ZPL9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ddx55Q6ZPL9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx55Q6ZPL9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Ddx55Q6ZPL9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ddx55Q6ZPL9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC21.65■■□□□ 1.06
Ddx55Q6ZPL9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ddx55Q6ZPL9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx55Q6ZPL9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx55Q6ZPL9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx55Q6ZPL9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ddx55Q6ZPL9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Gm11643-201ENSMUST00000119578 864 ntBASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ddx55Q6ZPL9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ddx55Q6ZPL9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.62■■□□□ 1.05
Ddx55Q6ZPL9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ddx55Q6ZPL9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ddx55Q6ZPL9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms