Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
NfrkbQ6PIJ4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NfrkbQ6PIJ4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NfrkbQ6PIJ4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NfrkbQ6PIJ4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
NfrkbQ6PIJ4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NfrkbQ6PIJ4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.33■■□□□ 1.01
NfrkbQ6PIJ4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.33■■□□□ 1
NfrkbQ6PIJ4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.33■■□□□ 1
NfrkbQ6PIJ4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NfrkbQ6PIJ4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
NfrkbQ6PIJ4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NfrkbQ6PIJ4 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.33■■□□□ 1
NfrkbQ6PIJ4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.32■■□□□ 1
NfrkbQ6PIJ4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.31■■□□□ 1
NfrkbQ6PIJ4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Rab3c-203ENSMUST00000224180 967 ntBASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NfrkbQ6PIJ4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Trmt13-210ENSMUST00000198454 880 ntBASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.29■■□□□ 1
NfrkbQ6PIJ4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
NfrkbQ6PIJ4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NfrkbQ6PIJ4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.28■■□□□ 1
NfrkbQ6PIJ4 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.28■■□□□ 1
NfrkbQ6PIJ4 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.28■■□□□ 1
NfrkbQ6PIJ4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.28■■□□□ 1
NfrkbQ6PIJ4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.28■■□□□ 1
NfrkbQ6PIJ4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.27■■□□□ 1
NfrkbQ6PIJ4 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.27■■□□□ 1
NfrkbQ6PIJ4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.27■■□□□ 1
NfrkbQ6PIJ4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NfrkbQ6PIJ4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.26■□□□□ 0.99
NfrkbQ6PIJ4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms