Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Gm27405-201ENSMUST00000184201 112 ntBASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Gm7291-201ENSMUST00000199147 382 ntBASIC17.83■□□□□ 0.44
Trim45Q6PFY8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim45Q6PFY8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim45Q6PFY8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim45Q6PFY8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Gm42569-201ENSMUST00000200539 472 ntBASIC17.8■□□□□ 0.44
Trim45Q6PFY8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim45Q6PFY8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Gm18671-201ENSMUST00000214826 683 ntBASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim45Q6PFY8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Gm42778-201ENSMUST00000199644 553 ntBASIC17.78■□□□□ 0.44
Trim45Q6PFY8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim45Q6PFY8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim45Q6PFY8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim45Q6PFY8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim45Q6PFY8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Trim45Q6PFY8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim45Q6PFY8 AV356131-201ENSMUST00000206201 750 ntBASIC17.77■□□□□ 0.44
Trim45Q6PFY8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.77■□□□□ 0.44
Trim45Q6PFY8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim45Q6PFY8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms