Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rai1Q61818 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rai1Q61818 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rai1Q61818 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rai1Q61818 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.39■□□□□ 0.53
Rai1Q61818 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Rai1Q61818 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Rai1Q61818 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.38■□□□□ 0.53
Rai1Q61818 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rai1Q61818 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rai1Q61818 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Gm18666-201ENSMUST00000190039 958 ntBASIC18.37■□□□□ 0.53
Rai1Q61818 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.37■□□□□ 0.53
Rai1Q61818 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rai1Q61818 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.37■□□□□ 0.53
Rai1Q61818 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rai1Q61818 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rai1Q61818 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rai1Q61818 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Rai1Q61818 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rai1Q61818 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rai1Q61818 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rai1Q61818 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rai1Q61818 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rai1Q61818 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rai1Q61818 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rai1Q61818 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.35■□□□□ 0.53
Rai1Q61818 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rai1Q61818 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Rai1Q61818 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.35■□□□□ 0.53
Rai1Q61818 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.35■□□□□ 0.53
Rai1Q61818 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Rai1Q61818 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rai1Q61818 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rai1Q61818 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.35■□□□□ 0.53
Rai1Q61818 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rai1Q61818 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rai1Q61818 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rai1Q61818 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rai1Q61818 Gm13158-201ENSMUST00000122007 736 ntBASIC18.35■□□□□ 0.53
Rai1Q61818 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rai1Q61818 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rai1Q61818 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rai1Q61818 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.34■□□□□ 0.53
Rai1Q61818 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rai1Q61818 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rai1Q61818 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rai1Q61818 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
Rai1Q61818 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rai1Q61818 Mir1199-201ENSMUST00000117015 119 ntBASIC18.33■□□□□ 0.53
Rai1Q61818 Gm15565-201ENSMUST00000118890 427 ntBASIC18.33■□□□□ 0.53
Rai1Q61818 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Rai1Q61818 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.33■□□□□ 0.53
Rai1Q61818 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.33■□□□□ 0.53
Rai1Q61818 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Rai1Q61818 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.33■□□□□ 0.53
Rai1Q61818 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rai1Q61818 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rai1Q61818 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rai1Q61818 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rai1Q61818 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.33■□□□□ 0.52
Rai1Q61818 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rai1Q61818 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rai1Q61818 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rai1Q61818 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.33■□□□□ 0.52
Rai1Q61818 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.33■□□□□ 0.52
Rai1Q61818 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rai1Q61818 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rai1Q61818 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rai1Q61818 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.32■□□□□ 0.52
Rai1Q61818 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.32■□□□□ 0.52
Rai1Q61818 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rai1Q61818 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.32■□□□□ 0.52
Rai1Q61818 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms