Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.06■□□□□ 0.96
Ecm1Q61508 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Ecm1Q61508 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.06■□□□□ 0.96
Ecm1Q61508 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.06■□□□□ 0.96
Ecm1Q61508 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ecm1Q61508 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.05■□□□□ 0.96
Ecm1Q61508 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ecm1Q61508 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ecm1Q61508 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.05■□□□□ 0.96
Ecm1Q61508 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ecm1Q61508 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.05■□□□□ 0.96
Ecm1Q61508 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ecm1Q61508 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Gm715-201ENSMUST00000117865 831 ntBASIC21.04■□□□□ 0.96
Ecm1Q61508 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ecm1Q61508 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ecm1Q61508 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ecm1Q61508 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ecm1Q61508 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ecm1Q61508 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ecm1Q61508 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ecm1Q61508 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ecm1Q61508 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ecm1Q61508 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ecm1Q61508 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ecm1Q61508 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ecm1Q61508 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ecm1Q61508 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.02■□□□□ 0.96
Ecm1Q61508 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.02■□□□□ 0.96
Ecm1Q61508 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.02■□□□□ 0.96
Ecm1Q61508 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.02■□□□□ 0.96
Ecm1Q61508 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ecm1Q61508 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ecm1Q61508 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.01■□□□□ 0.95
Ecm1Q61508 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ecm1Q61508 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ecm1Q61508 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ecm1Q61508 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Ecm1Q61508 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.01■□□□□ 0.95
Ecm1Q61508 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.01■□□□□ 0.95
Ecm1Q61508 Gm7977-201ENSMUST00000193787 748 ntBASIC21.01■□□□□ 0.95
Ecm1Q61508 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.01■□□□□ 0.95
Ecm1Q61508 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ecm1Q61508 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ecm1Q61508 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ecm1Q61508 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ecm1Q61508 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ecm1Q61508 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ecm1Q61508 Gm43006-201ENSMUST00000197702 1602 ntBASIC21■□□□□ 0.95
Ecm1Q61508 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ecm1Q61508 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ecm1Q61508 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ecm1Q61508 AC140264.2-202ENSMUST00000218746 817 ntBASIC21■□□□□ 0.95
Ecm1Q61508 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Ecm1Q61508 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ecm1Q61508 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Ecm1Q61508 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Ecm1Q61508 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Ecm1Q61508 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ecm1Q61508 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Ecm1Q61508 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ecm1Q61508 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ecm1Q61508 Gm15378-201ENSMUST00000121894 207 ntBASIC20.99■□□□□ 0.95
Ecm1Q61508 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.99■□□□□ 0.95
Ecm1Q61508 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ecm1Q61508 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ecm1Q61508 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ecm1Q61508 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ecm1Q61508 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms