Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ift88Q61371 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.88■□□□□ 0.93
Ift88Q61371 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.88■□□□□ 0.93
Ift88Q61371 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.88■□□□□ 0.93
Ift88Q61371 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ift88Q61371 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ift88Q61371 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.88■□□□□ 0.93
Ift88Q61371 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.88■□□□□ 0.93
Ift88Q61371 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ift88Q61371 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.87■□□□□ 0.93
Ift88Q61371 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ift88Q61371 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ift88Q61371 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Ift88Q61371 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ift88Q61371 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ift88Q61371 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ift88Q61371 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ift88Q61371 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Ift88Q61371 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Ift88Q61371 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.86■□□□□ 0.93
Ift88Q61371 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.86■□□□□ 0.93
Ift88Q61371 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.86■□□□□ 0.93
Ift88Q61371 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
Ift88Q61371 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ift88Q61371 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ift88Q61371 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
Ift88Q61371 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Ift88Q61371 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Ift88Q61371 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ift88Q61371 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ift88Q61371 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Ift88Q61371 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.85■□□□□ 0.93
Ift88Q61371 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.85■□□□□ 0.93
Ift88Q61371 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.85■□□□□ 0.93
Ift88Q61371 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ift88Q61371 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ift88Q61371 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ift88Q61371 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ift88Q61371 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ift88Q61371 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ift88Q61371 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.84■□□□□ 0.93
Ift88Q61371 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ift88Q61371 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ift88Q61371 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ift88Q61371 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ift88Q61371 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ift88Q61371 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ift88Q61371 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ift88Q61371 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ift88Q61371 Gm12251-201ENSMUST00000117893 792 ntBASIC20.83■□□□□ 0.93
Ift88Q61371 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.83■□□□□ 0.93
Ift88Q61371 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ift88Q61371 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ift88Q61371 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ift88Q61371 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ift88Q61371 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.83■□□□□ 0.92
Ift88Q61371 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ift88Q61371 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ift88Q61371 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ift88Q61371 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ift88Q61371 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ift88Q61371 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ift88Q61371 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ift88Q61371 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ift88Q61371 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.82■□□□□ 0.92
Ift88Q61371 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ift88Q61371 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ift88Q61371 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.82■□□□□ 0.92
Ift88Q61371 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ift88Q61371 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Ift88Q61371 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ift88Q61371 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ift88Q61371 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ift88Q61371 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms