Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.69■□□□□ 0.58
Cacna1eQ61290 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Cacna1eQ61290 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Cacna1eQ61290 Gm13158-201ENSMUST00000122007 736 ntBASIC18.67■□□□□ 0.58
Cacna1eQ61290 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.67■□□□□ 0.58
Cacna1eQ61290 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Gm2399-201ENSMUST00000104944 225 ntBASIC18.67■□□□□ 0.58
Cacna1eQ61290 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Gm11249-201ENSMUST00000117071 859 ntBASIC18.67■□□□□ 0.58
Cacna1eQ61290 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1eQ61290 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1eQ61290 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.66■□□□□ 0.58
Cacna1eQ61290 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Gm6576-201ENSMUST00000169678 883 ntBASIC18.66■□□□□ 0.58
Cacna1eQ61290 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1eQ61290 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1eQ61290 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1eQ61290 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1eQ61290 Mir1199-201ENSMUST00000117015 119 ntBASIC18.65■□□□□ 0.58
Cacna1eQ61290 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cacna1eQ61290 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cacna1eQ61290 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.64■□□□□ 0.57
Cacna1eQ61290 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1eQ61290 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Cacna1eQ61290 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1eQ61290 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.64■□□□□ 0.57
Cacna1eQ61290 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.64■□□□□ 0.57
Cacna1eQ61290 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1eQ61290 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1eQ61290 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cacna1eQ61290 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.63■□□□□ 0.57
Cacna1eQ61290 Gm37055-201ENSMUST00000191866 133 ntBASIC18.63■□□□□ 0.57
Cacna1eQ61290 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cacna1eQ61290 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1eQ61290 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.62■□□□□ 0.57
Cacna1eQ61290 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cacna1eQ61290 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Cacna1eQ61290 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Cacna1eQ61290 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1eQ61290 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cacna1eQ61290 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cacna1eQ61290 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.61■□□□□ 0.57
Cacna1eQ61290 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cacna1eQ61290 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms