Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.96■□□□□ 0.63
Col12a1Q60847 Gm11539-201ENSMUST00000119837 557 ntBASIC18.96■□□□□ 0.63
Col12a1Q60847 Gm13436-201ENSMUST00000120418 567 ntBASIC18.96■□□□□ 0.63
Col12a1Q60847 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.96■□□□□ 0.63
Col12a1Q60847 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Col12a1Q60847 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col12a1Q60847 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.95■□□□□ 0.62
Col12a1Q60847 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col12a1Q60847 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col12a1Q60847 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.95■□□□□ 0.62
Col12a1Q60847 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col12a1Q60847 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col12a1Q60847 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Gm33142-201ENSMUST00000193913 867 ntBASIC18.94■□□□□ 0.62
Col12a1Q60847 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.94■□□□□ 0.62
Col12a1Q60847 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Col12a1Q60847 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.94■□□□□ 0.62
Col12a1Q60847 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.94■□□□□ 0.62
Col12a1Q60847 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col12a1Q60847 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col12a1Q60847 Gm13158-201ENSMUST00000122007 736 ntBASIC18.93■□□□□ 0.62
Col12a1Q60847 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col12a1Q60847 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col12a1Q60847 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.93■□□□□ 0.62
Col12a1Q60847 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col12a1Q60847 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col12a1Q60847 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col12a1Q60847 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Col12a1Q60847 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col12a1Q60847 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col12a1Q60847 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col12a1Q60847 Gm30025-201ENSMUST00000218555 728 ntBASIC18.92■□□□□ 0.62
Col12a1Q60847 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col12a1Q60847 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col12a1Q60847 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col12a1Q60847 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col12a1Q60847 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col12a1Q60847 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col12a1Q60847 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col12a1Q60847 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col12a1Q60847 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col12a1Q60847 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.91■□□□□ 0.62
Col12a1Q60847 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col12a1Q60847 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col12a1Q60847 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.9■□□□□ 0.62
Col12a1Q60847 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col12a1Q60847 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col12a1Q60847 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.9■□□□□ 0.62
Col12a1Q60847 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col12a1Q60847 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Col12a1Q60847 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.89■□□□□ 0.62
Col12a1Q60847 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col12a1Q60847 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col12a1Q60847 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Col12a1Q60847 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col12a1Q60847 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col12a1Q60847 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.89■□□□□ 0.61
Col12a1Q60847 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col12a1Q60847 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.88■□□□□ 0.61
Col12a1Q60847 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col12a1Q60847 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Col12a1Q60847 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col12a1Q60847 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Col12a1Q60847 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Col12a1Q60847 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col12a1Q60847 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Gm7461-201ENSMUST00000058918 827 ntBASIC18.87■□□□□ 0.61
Col12a1Q60847 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.87■□□□□ 0.61
Col12a1Q60847 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Gm9103-201ENSMUST00000119371 405 ntBASIC18.87■□□□□ 0.61
Col12a1Q60847 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Col12a1Q60847 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
Col12a1Q60847 Gm10013-201ENSMUST00000106074 672 ntBASIC18.87■□□□□ 0.61
Col12a1Q60847 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Col12a1Q60847 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col12a1Q60847 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Col12a1Q60847 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms